Index

_

__init__() (rapidtide.filter.NoncausalFilter method) (rapidtide.resample.FastResampler method)

_centered() (in module rapidtide.correlate) _check_valid_mode_shapes() (in module rapidtide.correlate) _datacheck_peakdetect() (in module rapidtide.fit)

A

arb_pass() (in module rapidtide.filter)

arbcorr() (in module rapidtide.correlate) arbresample() (in module rapidtide.resample)

B

blackmanharris() (in module rapidtide.filter)

C

calc_MI() (in module rapidtide.correlate) calcmotregressors() (in module rapidtide.io) calcsliceoffset() (in module rapidtide.resample) cepstraldelay() (in module rapidtide.correlate) check_autocorrelation() (in module rapidtide.correlate) checkifcifti() (in module rapidtide.io) checkifnifti() (in module rapidtide.io) checkifparfile() (in module rapidtide.io) checkiftext() (in module rapidtide.io) checkspacedimmatch() (in module rapidtide.io)

checkspacematch() (in module rapidtide.io) checkspaceresmatch() (in module rapidtide.io) checktimematch() (in module rapidtide.io) colspectolist() (in module rapidtide.io) complex_cepstrum() (in module rapidtide.miscmath) congrid() (in module rapidtide.resample) convolve_weighted_fft() (in module rapidtide.correlate) corrnormalize() (in module rapidtide.miscmath) cross_mutual_info() (in module rapidtide.correlate) csdfilter() (in module rapidtide.filter)

D

delayedcorr() (in module rapidtide.correlate) detrend() (in module rapidtide.fit) dobpfftfilt() (in module rapidtide.filter) dobpfiltfilt() (in module rapidtide.filter) dobptrapfftfilt() (in module rapidtide.filter) dohpfftfilt() (in module rapidtide.filter)

dohpfiltfilt() (in module rapidtide.filter) dohptrapfftfilt() (in module rapidtide.filter) dolpfftfilt() (in module rapidtide.filter) dolpfiltfilt() (in module rapidtide.filter) dolptrapfftfilt() (in module rapidtide.filter) doresample() (in module rapidtide.resample) dotwostepresample() (in module rapidtide.resample)

E

envdetect() (in module rapidtide.miscmath)

F

fastcorrelate() (in module rapidtide.correlate) FastResampler (class in rapidtide.resample) faststcorrelate() (in module rapidtide.correlate) findexecutable() (in module rapidtide.util) findfirstabove() (in module rapidtide.fit) findmaxlag_gauss() (in module rapidtide.fit) findmaxlag_gauss_rev() (in module rapidtide.fit)

findmaxlag_quad() (in module rapidtide.fit) findrisetimefunc() (in module rapidtide.fit) findtrapezoidfunc() (in module rapidtide.fit) fisher() (in module rapidtide.stats) fitjsbpdf() (in module rapidtide.stats) fmriheaderinfo() (in module rapidtide.io) fmritimeinfo() (in module rapidtide.io)

G

gauss_eval() (in module rapidtide.fit) gaussfit() (in module rapidtide.fit) gaussfitsk() (in module rapidtide.fit) gaussresiduals() (in module rapidtide.fit) gaussresidualssk() (in module rapidtide.fit) gausssk_eval() (in module rapidtide.fit) gaussskresiduals() (in module rapidtide.fit) gccproduct() (in module rapidtide.correlate) getciftitr() (in module rapidtide.io) getfracval() (in module rapidtide.stats) getfracvals() (in module rapidtide.stats)

getfracvalsfromfit() (in module rapidtide.stats) getfracvalsfromfit_old() (in module rapidtide.stats) getfreqs() (rapidtide.filter.NoncausalFilter method) gethistprops() (in module rapidtide.stats) getjohnsonppf() (in module rapidtide.stats) getlpfftfunc() (in module rapidtide.filter) getlptrapfftfunc() (in module rapidtide.filter) getniftiroot() (in module rapidtide.io) getpadtime() (rapidtide.filter.NoncausalFilter method) getslicetimesfromfile() (in module rapidtide.io) gettype() (rapidtide.filter.NoncausalFilter method)

H

hamming() (in module rapidtide.filter)

hann() (in module rapidtide.filter)

I

isexecutable() (in module rapidtide.util)

L

largestfac() (in module rapidtide.miscmath)

locpeak() (in module rapidtide.fit) logmem() (in module rapidtide.util)

M

makeandsavehistogram() (in module rapidtide.stats) makehistogram() (in module rapidtide.stats) makelaglist() (in module rapidtide.util) makemask() (in module rapidtide.stats) makepmask() (in module rapidtide.stats) maxindex_noedge() (in module rapidtide.fit) mlregress() (in module rapidtide.fit) module rapidtide.correlate rapidtide.filter rapidtide.fit rapidtide.io rapidtide.miscmath rapidtide.resample rapidtide.stats rapidtide.util rapidtide.workflows

mutual_info_2d() (in module rapidtide.correlate) mutual_info_to_r() (in module rapidtide.correlate)

N

niftimerge() (in module rapidtide.io) niftiroi() (in module rapidtide.io)

niftisplit() (in module rapidtide.io) niftisplitext() (in module rapidtide.io) NoncausalFilter (class in rapidtide.filter)

P

padvec() (in module rapidtide.filter) parabfit() (in module rapidtide.fit) parsefilespec() (in module rapidtide.io) parseniftidims() (in module rapidtide.io) parseniftisizes() (in module rapidtide.io) pcnormalize() (in module rapidtide.miscmath) peakdetect() (in module rapidtide.fit)

phase() (in module rapidtide.miscmath) polarfft() (in module rapidtide.miscmath) ppnormalize() (in module rapidtide.miscmath) primes() (in module rapidtide.miscmath) processnamespec() (in module rapidtide.io) proctiminginfo() (in module rapidtide.util) progressbar() (in module rapidtide.util) pspec() (in module rapidtide.filter)

R

rapidtide.correlate module rapidtide.filter module rapidtide.fit module rapidtide.io module rapidtide.miscmath module rapidtide.resample module rapidtide.stats module rapidtide.util module rapidtide.workflows module rapidtide_main() (in module rapidtide.workflows.rapidtide) readbidssidecar() (in module rapidtide.io) readbidstsv() (in module rapidtide.io)

readcolfrombidstsv() (in module rapidtide.io) readcolfromtextfile() (in module rapidtide.io) readdict() (in module rapidtide.io) readdictfromjson() (in module rapidtide.io) readfromcifti() (in module rapidtide.io) readfromnifti() (in module rapidtide.io) readlabelledtsv() (in module rapidtide.io) readlabels() (in module rapidtide.io) readmotion() (in module rapidtide.io) readoptionsfile() (in module rapidtide.io) readparfile() (in module rapidtide.io) readtc() (in module rapidtide.io) readvec() (in module rapidtide.io) readvecs() (in module rapidtide.io) readvectorsfromtextfile() (in module rapidtide.io) real_cepstrum() (in module rapidtide.miscmath) rfromp() (in module rapidtide.stats) risetime_eval() (in module rapidtide.fit) risetime_eval_loop() (in module rapidtide.fit) risetimeresiduals() (in module rapidtide.fit) rms() (in module rapidtide.miscmath)

S

savecommandline() (in module rapidtide.util) savetocifti() (in module rapidtide.io) savetonifti() (in module rapidtide.io) setbutterorder() (rapidtide.filter.NoncausalFilter method) setdebug() (rapidtide.filter.NoncausalFilter method) setfreqs() (rapidtide.filter.NoncausalFilter method) setpadtime() (rapidtide.filter.NoncausalFilter method) settype() (rapidtide.filter.NoncausalFilter method)

shorttermcorr_1D() (in module rapidtide.correlate) shorttermcorr_2D() (in module rapidtide.correlate) sigFromDistributionData() (in module rapidtide.stats) sliceinfo() (in module rapidtide.io) spectrum() (in module rapidtide.filter) ssmooth() (in module rapidtide.filter) stdnormalize() (in module rapidtide.miscmath) symmetrize() (in module rapidtide.stats)

T

tfromr() (in module rapidtide.stats) thederiv() (in module rapidtide.miscmath) timefmt() (in module rapidtide.util) timeshift() (in module rapidtide.resample)

transferfuncfilt() (in module rapidtide.filter) trapezoid_eval() (in module rapidtide.fit) trapezoid_eval_loop() (in module rapidtide.fit) trapezoidresiduals() (in module rapidtide.fit) trendgen() (in module rapidtide.fit)

U

unpadvec() (in module rapidtide.filter)

V

valtoindex() (in module rapidtide.util)

varnormalize() (in module rapidtide.miscmath) version() (in module rapidtide.util)

W

wiener_deconvolution() (in module rapidtide.filter) windowfunction() (in module rapidtide.filter) writebidstsv() (in module rapidtide.io)

writedict() (in module rapidtide.io) writedicttojson() (in module rapidtide.io) writenpvecs() (in module rapidtide.io) writevec() (in module rapidtide.io)

Z

zfromr() (in module rapidtide.stats)

znormalize() (in module rapidtide.miscmath)