glmfilt

Description:

Uses a GLM filter to remove timecourses (1D text files or 4D NIFTI files) from 4D NIFTI files.

Inputs:

Outputs:

Usage:

Fits and removes the effect of voxel specific and/or global regressors.

usage: glmfilt [-h] [--numskip NUMSKIP] [--evfile EVFILE [EVFILE ...]]
               [--dmask DATAMASK] [--limitoutput]
               inputfile outputroot

Positional Arguments

inputfile: The name of the 3 or 4 dimensional nifti file to fit.
outputroot: The root name for all output files.

Named Arguments

--numskip

The number of points to skip at the beginning of the timecourse when fitting. Default is 0.

Default: 0

--evfile

One or more files (text timecourse or 4D NIFTI) containing signals to regress out.

--dmask

Use DATAMASK to specify which voxels in the data to use.

--limitoutput

Only save the filtered data and the R value.

Default: True