rankimage

Description:

Convert a 3D or 4D NIFTI file into a map of each voxel’s rank in the map values.

Inputs:

A 3D or 4D NIFTI file.

Outputs:

A 3D or 4D NIFTI file of voxel ranks scaled from 0-100. If 4D, each timepoint is considered separately.

Usage:

Convert a 3D or 4D nifti image into a percentile map.

usage: rankimage [-h] [--debug] inputfilename maskfilename outputroot

Positional Arguments

inputfilename

The name of the input image nifti file.

maskfilename

The name of the input mask nifti file.

outputroot

The root name of the output files.

Named Arguments

--debug

Output additional debugging information.

Default: False