mergequality

Description:

Merge rapidtide quality check data from several runs.

Inputs:

One or more json files containing rapidtide dataset quality metrics (outputs of runqualitycheck or other tools).

Outputs:

A csv file with one row per input file, and one column per quality metric, and one histogram file per metric showing the distribution of values over all subjects.

Usage:

Merge rapidtide quality check data from several runs.

usage: mergequality [-h] --input [INPUT ...] --outputroot OUTPUTROOT
                    [--keyfile KEYFILE] [--showhists] [--addgraymetrics]
                    [--addwhitemetrics] [--debug]

Named Arguments

--input

--outputroot

--keyfile

--showhists

Display the histograms of the tracked quantities.

Default: False

--addgraymetrics

Include gray matter only metrics.

Default: False

--addwhitemetrics

Include white matter only metrics.

Default: False

--debug

Output additional debugging information.

Default: False